nf-core/raven @ 0.0.0-6c4ed3a
Summary
De novo genome assembler for long uncorrected reads.
Get started
Add the following snippet to your workflow script to include this module.
include { RAVEN } from 'nf-core/raven'
License
MIT License
Process
Name
|
RAVEN |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', suffix:'bacteria' ] |
|---|---|
reads
file
|
Input file in FASTA/FASTQ format. *.{fasta,fastq,fasta.gz,fastq.gz,fa,fq,fa.gz,fq.gz}
|
Output
3 channels
#1
gfa
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', suffix:'bacteria' ] |
|---|---|
*.gfa.gz
file
|
Repeat graph *.gfa.gz
|
#2
fasta
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', suffix:'bacteria' ] |
|---|---|
*.fasta.gz
file
|
Assembled FASTA file *.fasta.gz
|
#3
versions_raven
tuple
${task.process}
string
|
The name of the process |
|---|---|
raven
string
|
The name of the tool |
raven --version
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| raven | Raven is a de novo genome assembler for long uncorrected reads. | https://github.com/lbcb-sci/raven |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:40:32 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fraven/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/raven/blobs/sha256:d7e1223d3a0ae51586e70c4a564d71eddb1b2ab4056749f217a3837a0af3ddc2 |
| Size | 2.2 KB |
| Checksum | sha256:d7e1223d3a0ae51586e70c4a564d71eddb1b2ab4056749f217a3837a0af3ddc2 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:40:32 (UTC) | 3 | 2.2 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:28:45 (UTC) | 3 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:30:22 (UTC) | 3 | 2.2 KB |