nf-core/segemehl/index @ 0.0.0-0c7146d
Summary
Generate genome indices for segemehl align
Get started
Add the following snippet to your workflow script to include this module.
include { SEGEMEHL_INDEX } from 'nf-core/segemehl/index'
License
MIT License
Process
Name
|
SEGEMEHL_INDEX |
|---|
Input
1 channel
fasta
file
|
Reference genome FASTA file *.{fa,fasta}
|
|---|
Output
2 channels
#1
index
*.idx
file
|
Segemehl index file *.{idx}
|
|---|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| segemehl | A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection | https://www.bioinf.uni-leipzig.de/Software/segemehl/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:35:30 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fsegemehl%2Findex/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/segemehl/index/blobs/sha256:a3980a14354e936ad2a57d35a42b2c064c373dcff974c4bdd70a074ace1b29ff |
| Size | 2.0 KB |
| Checksum | sha256:a3980a14354e936ad2a57d35a42b2c064c373dcff974c4bdd70a074ace1b29ff |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:43:47 (UTC) | 3 | 2.1 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:30:09 (UTC) | 3 | 2.1 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:35:30 (UTC) | 3 | 2.0 KB |