nf-core/skani/triangle @ 0.0.0-6c4ed3a
Summary
All-to-all ANI computation.
Get started
Add the following snippet to your workflow script to include this module.
include { SKANI_TRIANGLE } from 'nf-core/skani/triangle'
License
MIT License
Process
Name
|
SKANI_TRIANGLE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
queries
file
|
Space-separated list of FASTA(s)/skani sketch(es) to be used as query. *.{fasta,fasta.gz,fa,fa.gz,fna,fna.gz,sketch}
|
Output
2 channels
#1
triangle
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
${prefix}.tsv
file
|
TSV file containing ANIs and AFs calculated between queries. |
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| skani | skani is a fast and robust tool for calculating ANI between metagenome assembled genomes and contigs. | https://github.com/bluenote-1577/skani |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:46:22 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fskani%2Ftriangle/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/skani/triangle/blobs/sha256:dbe31d7077058912492e5051f7acc0b4d6337c0d2766bdce747008bc1a6da40e |
| Size | 2.3 KB |
| Checksum | sha256:dbe31d7077058912492e5051f7acc0b4d6337c0d2766bdce747008bc1a6da40e |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:46:22 (UTC) | 3 | 2.3 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:32:02 (UTC) | 3 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:38:58 (UTC) | 3 | 2.3 KB |