nf-core/snpeff/download @ 0.0.0-0c7146d
Summary
Genetic variant annotation and functional effect prediction toolbox
Get started
Add the following snippet to your workflow script to include this module.
include { SNPEFF_DOWNLOAD } from 'nf-core/snpeff/download'
License
MIT License
Process
Name
|
SNPEFF_DOWNLOAD |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
snpeff_db
string
|
SnpEff database name |
Output
2 channels
#1
cache
tuple
meta
file
|
snpEff cache |
|---|---|
snpeff_cache
file
|
snpEff cache |
#2
versions_snpeff
tuple
${task.process}
string
|
The process the versions were collected from |
|---|---|
snpeff
string
|
The tool name |
snpEff -version 2>&1 | cut -f 2 -d ' '
string
|
The command used to generate the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| snpeff | SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of genetic variants on genes and proteins (such as amino acid changes). | https://pcingola.github.io/SnpEff/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:39:25 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fsnpeff%2Fdownload/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/snpeff/download/blobs/sha256:0aed45c62b6e12ed357082088b1acc1cf5323dba6c8e1cd939a010b63fe725ab |
| Size | 2.5 KB |
| Checksum | sha256:0aed45c62b6e12ed357082088b1acc1cf5323dba6c8e1cd939a010b63fe725ab |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:46:40 (UTC) | 4 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:39:25 (UTC) | 3 | 2.5 KB |