Nextflow Modules
Showing module(s) with keyword "Pacbio"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/isoseq/cluster | Process | cluster HiFi isoseq Pacbio | IsoSeq - Cluster - Cluster trimmed consensus sequences |
| nf-core/isoseq/cluster2 | Process | cluster HiFi isoseq Pacbio | IsoSeq - Cluster2 - Cluster full-length non-chimeric reads into transcripts |
| nf-core/isoseq/groupdedup | Process | dedup single-cell isoseq Pacbio | IsoSeq - GroupDedup - Deduplicate PCR artifacts grouped by cell barcode |
| nf-core/sawfish/discover | Process | sawfish structural-variant calling CNV calling Pacbio | SV candidate discovery from PacBio HiFi data |
| nf-core/sawfish/jointcall | Process | sawfish structural-variant calling joint calling CNV calling Pacbio | Joint calling of structural variants from multiple samples using Sawfish |