Nextflow Modules
Showing module(s) with keyword "artic"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/artic/aligntrim | Process | artic primer trimming amplicon genomics sequencing nanopore illumina | Standalone version of fieldbioinformatics aligntrim. Soft clips amplicon scheme primer sites in BAM/SAM files. |
| nf-core/artic/guppyplex | Process | artic aggregate demultiplexed reads | Aggregates fastq files with demultiplexed reads |
| nf-core/artic/minion | Process | artic aggregate demultiplexed reads | Run the alignment/variant-call/consensus logic of the artic pipeline |