Nextflow Modules
Showing module(s) with keyword "blast"
| Module | Keywords | Description |
|---|---|---|
| nf-core/blast/blastdbcmd | fasta blast database retrieval identifier | Retrieve entries from a BLAST database |
| nf-core/blast/blastn | fasta blast blastn DNA sequence taxids | Queries a BLAST DNA database |
| nf-core/blast/blastp | fasta blast blastp protein | BLASTP (Basic Local Alignment Search Tool- Protein) compares an amino acid (protein) query sequence against a protein database |
| nf-core/blast/makeblastdb | fasta blast database | Builds a BLAST database |
| nf-core/blast/tblastn | fasta blast tblastn DNA sequence | Queries a BLAST DNA database |
| nf-core/blast/updateblastdb | fasta blast download database | Downloads a BLAST database from NCBI |
| nf-core/windowmasker/convert | fasta blast windowmasker | Masks out highly repetitive DNA sequences with low complexity in a genome |