Nextflow Modules
Showing module(s) with keyword "fcs-gx"
| Module | Keywords | Description |
|---|---|---|
| nf-core/fcsgx/cleangenome | genome assembly contamination screening cleaning fcs-gx | Runs FCS-GX (Foreign Contamination Screen - Genome eXtractor) to remove foreign contamination from genome assemblies |
| nf-core/fcsgx/fetchdb | fcs-gx database fetch ncbi | Fetches the NCBI FCS-GX database using a provided manifest URL |
| nf-core/fcsgx/rungx | genome assembly contamination screening cleaning fcs-gx | Runs FCS-GX (Foreign Contamination Screen - Genome eXtractor) to screen and remove foreign contamination from genome assemblies |