Nextflow Modules
Showing module(s) with keyword "resistance"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/ariba/getref | Process | fastq assembly resistance virulence | Download and prepare database for Ariba analysis |
| nf-core/ariba/run | Process | fastq assembly resistance virulence | Query input FASTQs against Ariba formatted databases |
| nf-core/mcroni | Process | resistance fasta mcr-1 | Analysis of mcr-1 gene (mobilized colistin resistance) for sequence variation |
| nf-core/tbprofiler/profile | Process | Mycobacterium tuberculosis resistance serotype | A tool to detect resistance and lineages of M. tuberculosis genomes |