Nextflow Registry | Nextflow Pipelines

Nextflow Pipelines

Nextflow pipelines hosted in Git repositories. Each published release records the Git revision it runs and the launch configuration it ships with.

2 pipeline(s) matching "multi-omics".

Pipeline	Keywords	Description
nf-core/epigenomesegmentation 0.0.0-09de6dc	epigenome multi-omics-integration segmentation	An nf-core pipeline for epigenome segmentation using EpiSegMix/Meth — a hidden Markov model with flexible read count distributions and state duration modeling for histone, open chromatin, and methylation signals.
nf-core/hicar 1.0.0	atac atac-seq hic hicar +2	Pipeline for HiCAR data, a robust and sensitive multi-omic co-assay for simultaneous measurement of transcriptome, chromatin accessibility and cis-regulatory chromatin contacts.