Nextflow Registry | nf-core/checkm2/databasedownload@0.0.0-6c4ed3a

nf-core/checkm2/databasedownload @ 0.0.0-6c4ed3a

CheckM2 database download

checkm mag metagenome quality completeness contamination bins

Latest version: 0.0.0-6c4ed3a

Total downloads: 6

Source: nf-core/modules

Authors: @dialvarezs @eit-maxlcummins

CheckM2 database download

Add the following snippet to your workflow script to include this module.

include { CHECKM2_DATABASEDOWNLOAD } from 'nf-core/checkm2/databasedownload'

MIT License

Process

`Name`	`CHECKM2_DATABASEDOWNLOAD`

Input 1 channel

`db_zenodo_id` integer	Zenodo ID of the CheckM2 database to download

Output 2 channels

#1 database tuple

`meta` map	Groovy Map containing database information e.g. `[ id:'test', version:1 ]`
`checkm2_db_v${db_version}.dmnd` file	CheckM2 database file `checkm2_db_v*.dmnd`

#2 versions_checkm2_databasedownload tuple

`${task.process}` string	The process the versions were collected from
`aria2` string	The tool name
`aria2c --version 2>&1 \| sed '1s/[^ ]* [^ ]* //; q'` eval	The expression to obtain the version of the tool

Tool	Description	Homepage
checkm2	CheckM2 - Rapid assessment of genome bin quality using machine learning	https://github.com/chklovski/CheckM2

Version	0.0.0-6c4ed3a
Commit ID	6c4ed3a220310b905a1fc9d04f05be2e0837142b
Release Date	23 Apr 2026 15:08:58 (UTC)
Download URL	https://registry.nextflow.io/api/v1/modules/nf-core%2Fcheckm2%2Fdatabasedownload/0.0.0-6c4ed3a/download
OCI Store URL	https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/checkm2/databasedownload/blobs/sha256:7fd91e949bc8ef2389cdca0c6ccd814c465a4dfd1d411e785ae8ad89fde21886
Size	2.7 KB
Checksum	sha256:7fd91e949bc8ef2389cdca0c6ccd814c465a4dfd1d411e785ae8ad89fde21886
Downloads	4

Version	Date	Status	Downloads	Size
0.0.0-6c4ed3a	23 Apr 2026 15:08:58 (UTC)		4	2.7 KB
0.0.0-0c7146d	08 Apr 2026 18:51:26 (UTC)		2	2.7 KB