|
nf-core/checkm2/databasedownload
|
checkm
mag
metagenome
quality
completeness
contamination
bins
|
CheckM2 database download
|
|
nf-core/checkm2/predict
|
checkm
mag
metagenome
quality
completeness
contamination
bins
|
CheckM2 bin quality prediction
|
|
nf-core/checkm/lineagewf
|
checkm
mag
metagenome
quality
isolates
microbes
single cells
completeness
contamination
bins
genome bins
|
CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes.
|
|
nf-core/checkm/qa
|
checkm
mag
metagenome
quality
isolates
microbes
single cells
completeness
contamination
bins
genome bins
qa
quality assurnce
|
CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes.
|
|
nf-core/checkv/downloaddatabase
|
checkv
checkm
mag
metagenome
quality
isolates
virus
completeness
contamination
download
database
|
Construct the database necessary for checkv's quality assessment
|
|
nf-core/checkv/endtoend
|
checkv
checkm
mag
metagenome
quality
isolates
virus
completeness
contamination
|
Assess the quality of metagenome-assembled viral genomes.
|
|
nf-core/checkv/updatedatabase
|
checkv
checkm
mag
metagenome
quality
isolates
virus
completeness
contamination
|
Construct the database necessary for checkv's quality assessment
|
|
nf-core/metamdbg/asm
|
assembly
long reads
metagenome
metagenome assembler
|
Metagenome assembler for long-read sequences (HiFi and ONT).
|
|
nf-core/myloasm
|
assembly
metagenome
long-read
pacbio
nanopore
|
Myloasm is a de novo metagenome assembler for long-read sequencing data.
It takes sequencing reads and outputs polished contigs in a single command.
|