nf-core/drep/compare @ 0.0.0-0c7146d
Summary
Performs rapid genome comparisons for a group of genomes and visualize their relatedness
Get started
Add the following snippet to your workflow script to include this module.
include { DREP_COMPARE } from 'nf-core/drep/compare'
License
MIT License
Process
Name
|
DREP_COMPARE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
fastas/*
file
|
List of FASTA files to compare *.{fasta,fa,fna,fas}
|
Output
2 channels
#1
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#2
directory
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
${prefix}
directory
|
Directory containing output files, such as PDF figures and intermediate tables for use in dRep dereplicate ${prefix}/
|
| Tool | Description | Homepage |
|---|---|---|
| drep | De-replication of microbial genomes assembled from multiple samples | https://drep.readthedocs.io/en/latest/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 18:56:44 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fdrep%2Fcompare/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/drep/compare/blobs/sha256:107e13055c3b92fd4ceff81c5f4449cb52bc8b5e834cffa2f46627e6f8f728e1 |
| Size | 2.8 KB |
| Checksum | sha256:107e13055c3b92fd4ceff81c5f4449cb52bc8b5e834cffa2f46627e6f8f728e1 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:13:40 (UTC) | 3 | 2.8 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:09:52 (UTC) | 3 | 2.8 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:56:44 (UTC) | 3 | 2.8 KB |