nf-core/gfatools/stat @ 0.0.0-3fc6d40
Summary
Summary statistics for GFA files
Get started
Add the following snippet to your workflow script to include this module.
include { GFATOOLS_STAT } from 'nf-core/gfatools/stat'
License
MIT License
Process
Name
|
GFATOOLS_STAT |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
gfa
file
|
GFA or rGFA file *.gfa
|
Output
2 channels
#1
stats
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.stats
file
|
Summary statistics of the GFA file *.stats
|
#2
versions_gfatools
tuple
${task.process}
string
|
The name of the process |
|---|---|
gfatools
string
|
The name of the tool |
gfatools version | sed '1!d; s/.* //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| gfatools | Tools for manipulating sequence graphs in the GFA and rGFA formats | https://github.com/lh3/gfatools |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:13:56 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fgfatools%2Fstat/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/gfatools/stat/blobs/sha256:7663aa7d9cb4503d87092f89bcebe02ef7a5521ab3c0976092cbbfe6a6d940e3 |
| Size | 2.2 KB |
| Checksum | sha256:7663aa7d9cb4503d87092f89bcebe02ef7a5521ab3c0976092cbbfe6a6d940e3 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:21:24 (UTC) | 4 | 2.1 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:13:56 (UTC) | 3 | 2.2 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:06:06 (UTC) | 3 | 2.1 KB |