nf-core/last/split @ 0.0.0-0c7146d
Summary
Find split or spliced alignments in a MAF file
Get started
Add the following snippet to your workflow script to include this module.
include { LAST_SPLIT } from 'nf-core/last/split'
License
MIT License
Name
|
LAST_SPLIT |
|---|
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
maf
file
|
Multiple Alignment Format (MAF) file, compressed with gzip *.{maf.gz}
|
maf
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.maf.gz
file
|
Multiple Alignment Format (MAF) file, compressed with gzip *.{maf.gz}
|
multiqc
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.tsv
file
|
Summary reporting the total alignment length (including gaps) and the percent identity computed with and without taking gaps in consideration (because there is no standard definition of percent identity). *.tsv
|
versions_last
tuple
${task.process}
string
|
The name of the process |
|---|---|
last
string
|
The name of the tool |
lastal --version | sed 's/lastal //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| last | LAST finds & aligns related regions of sequences. | https://gitlab.com/mcfrith/last |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:13:50 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Flast%2Fsplit/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/last/split/blobs/sha256:e474a63eb5f05a24e47479e9546775ce5a7e1d0b6b6e4b69cf0193e1ac94a8c8 |
| Size | 3.5 KB |
| Checksum | sha256:e474a63eb5f05a24e47479e9546775ce5a7e1d0b6b6e4b69cf0193e1ac94a8c8 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:27:36 (UTC) | 3 | 3.5 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:13:50 (UTC) | 3 | 3.5 KB |