nf-core/meryl/histogram @ 0.0.0-6c4ed3a
Summary
A genomic k-mer counter (and sequence utility) with nice features.
Get started
Add the following snippet to your workflow script to include this module.
include { MERYL_HISTOGRAM } from 'nf-core/meryl/histogram'
License
MIT License
Process
Name
|
MERYL_HISTOGRAM |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
meryl_db
directory
|
Meryl k-mer database |
kvalue
integer
|
An integer value of k to use as the k-mer value. |
|---|
Output
2 channels
#1
hist
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.hist
file
|
Histogram of k-mers *.hist
|
#2
versions_meryl
tuple
${task.process}
string
|
The name of the process |
|---|---|
meryl
string
|
The name of the tool |
meryl --version |& sed 's/meryl //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| meryl | A genomic k-mer counter (and sequence utility) with nice features. | https://github.com/marbl/meryl |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:30:04 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fmeryl%2Fhistogram/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/meryl/histogram/blobs/sha256:e658d2acc586c2f158f2e3cc81e01150e358e2699ee47fee27e4476f7343064a |
| Size | 2.3 KB |
| Checksum | sha256:e658d2acc586c2f158f2e3cc81e01150e358e2699ee47fee27e4476f7343064a |
| Downloads | 5 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:30:04 (UTC) | 5 | 2.3 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:21:24 (UTC) | 4 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:17:08 (UTC) | 3 | 2.3 KB |