nf-core/vembrane/table @ 0.0.0-0c7146d
Summary
Creates tabular (TSV) files from VCF/BCF data with flexible Python expressions
Get started
Add the following snippet to your workflow script to include this module.
include { VEMBRANE_TABLE } from 'nf-core/vembrane/table'
License
MIT License
Process
Name
|
VEMBRANE_TABLE |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
vcf
file
|
VCF/BCF file to extract tabular data from *.{vcf,vcf.gz,bcf,bcf.gz}
|
expression
string
|
A comma-separated tuple of expressions that define the table column contents |
|---|
Output
2 channels
#1
table
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.tsv
file
|
TSV file containing tabular data from VCF/BCF *.tsv
|
#2
versions_vembrane
tuple
${task.process}
string
|
The process the versions were collected from |
|---|---|
vembrane
string
|
The tool name |
vembrane --version | sed '1!d;s/.* //'
string
|
The command used to generate the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| vembrane | Filter VCF/BCF files with Python expressions | https://vembrane.github.io/ |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:46:41 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fvembrane%2Ftable/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/vembrane/table/blobs/sha256:22f10ac59221500a78dc780f7198a9d28bb26c1bca3bb1c76f4c45dbf3c3863e |
| Size | 2.8 KB |
| Checksum | sha256:22f10ac59221500a78dc780f7198a9d28bb26c1bca3bb1c76f4c45dbf3c3863e |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:52:22 (UTC) | 4 | 2.8 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:36:15 (UTC) | 3 | 2.8 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:46:41 (UTC) | 4 | 2.8 KB |