Nextflow Modules
Showing module(s) with keyword "aln"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/bwa/aln | Process | bwa aln short-read align reference fasta map fastq | Find SA coordinates of the input reads for bwa short-read mapping |
| nf-core/bwa/sampe | Process | bwa aln short-read align reference fasta map sam bam | Convert paired-end bwa SA coordinate files to SAM format |
| nf-core/bwa/samse | Process | bwa aln short-read align reference fasta map sam bam | Convert bwa SA coordinate file to SAM format |
| nf-core/fastq_align_bwaaln | Workflow | bwa aln fasta bwa align map | Align FASTQ files against reference genome with the bwa aln short-read aligner producing a sorted and indexed BAM files |