Nextflow Registry | Nextflow Modules

Nextflow Modules

Showing module(s) with keyword "arg"

Module	Keywords	Description
nf-core/argnorm	amr antimicrobial resistance arg antimicrobial resistance genes genomics metagenomics normalization drug categorization	Normalize antibiotic resistance genes (ARGs) using the ARO ontology (developed by CARD).
nf-core/deeparg/predict	deeparg antimicrobial resistance antimicrobial resistance genes arg deep learning prediction contigs metagenomes	A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes
nf-core/hamronization/amrfinderplus	amr antimicrobial resistance arg antimicrobial resistance genes reporting amrfinderplus	Tool to convert and summarize AMRfinderPlus outputs using the hAMRonization specification.
nf-core/hamronization/fargene	amr antimicrobial resistance arg antimicrobial resistance genes reporting fARGene	Tool to convert and summarize fARGene outputs using the hAMRonization specification
nf-core/hamronization/rgi	amr antimicrobial resistance arg antimicrobial resistance genes reporting rgi	Tool to convert and summarize RGI outputs using the hAMRonization specification.