Nextflow Modules
Showing module(s) with keyword "call"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/cnvpytor/callcnvs | Process | CNV call wgs | Command line tool for calling CNVs in whole genome sequencing data |
| nf-core/cnvpytor/importreaddepth | Process | read depth cnv cna call | command line tool for CNV/CNA analysis. This step imports the read depth data into a root pytor file. |
| nf-core/cnvpytor/partition | Process | cnv call partition histogram | Calculate segmentation for specified bin size (multiple bin sizes separate by space) |
| nf-core/lofreq/callparallel | Process | variant calling low frequency variant calling call variants | It predicts variants using multiple processors |
| nf-core/platypus | Process | variant call dna genetic | Platypus is a tool that efficiently and accurately calling genetic variants from next-generation DNA sequencing data |
| nf-core/plink/vcf | Process | plink vcf variant call | Analyses variant calling files using plink |