Nextflow Modules
Showing module(s) with keyword "concordance"
| Module | Keywords | Description |
|---|---|---|
| nf-core/gatk4/concordance | concordance gatk4 gatk genomics variant calling genotyping vcf comparison | Evaluate concordance of an input VCF against a validated truth VCF |
| nf-core/glimpse2/concordance | concordance low-coverage glimpse imputation | Program to compute the genotyping error rate at the sample or marker level. |
| nf-core/glimpse/concordance | concordance low-coverage glimpse imputation | Compute the r2 correlation between imputed dosages (in MAF bins) and highly-confident genotype calls from the high-coverage dataset. |