Nextflow Modules
Showing module(s) with keyword "exon"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/dexseq/count | Process | dexseq exon count alternative splicing differential exon usage | Count the reads overlapping the exonic counting bins of a DEXSeq annotation |
| nf-core/dexseq/exon | Process | dexseq exon differential exon usage alternative splicing rna-seq | Test a contrast for differential exon usage with DEXSeq, from the exon counts of dexseq/count |
| nf-core/dexseq/prepareannotation | Process | dexseq exon annotation gtf alternative splicing differential exon usage | Flatten a GTF annotation into the exonic counting bins used by DEXSeq |
| nf-core/rmats/prep | Process | splicing RNA-Seq alternative splicing exon intron rMATS | MATS is a computational tool to detect differential alternative splicing events from RNA-Seq data. |