Nextflow Modules
Showing module(s) with keyword "faidx"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/fasta_bgzip_index_dict_samtools | Workflow | bgzip faidx dict fasta | Ensure BGZF compression, index, and produce a sequence size summary and a sequence dictionary for each FASTA file. |
| nf-core/fasta_clean_faidx | Process | index faidx dict gunzip fasta | Ensure input fasta assemblies are unzipped and indexed, optionally generating a chromosome sizes file. |
| nf-core/samtools/faidx | Process | index fasta faidx chromosome | Index FASTA file, and optionally generate a file of chromosome sizes |