Nextflow Modules
Showing module(s) with keyword "microarray"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/affy/justrma | Process | affy microarray expression matrix | Read CEL files into an ExpressionSet and generate a matrix |
| nf-core/geofetch | Process | GEO expression microarray sequencing | geofetch is a command-line tool that downloads and organizes data and metadata from GEO and SRA |
| nf-core/geoquery/getgeo | Process | geo expression microarray | Retrieves GEO data from the Gene Expression Omnibus (GEO) |
| nf-core/limma/differential | Process | differential expression microarray limma | runs a differential expression analysis with Limma |