Nextflow Modules
Showing module(s) with keyword "snpsift"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/snpsift/annmem | Process | vcf annotation snpsift variant database | Annotate VCF files using pre-built SnpSift annMem databases. Enriches input VCF records by querying memory-optimized indexed dataframes for high-performance annotation. |
| nf-core/snpsift/annmemcreate | Process | vcf annotation snpsift variant database | Create memory-optimized SnpSift vardb databases from VCF files for use with SnpSift annMem annotation. Converts VCF files (e.g. ClinVar, dbSNP, Cosmic) into indexed dataframes for fast lookup. |
| nf-core/snpsift/annotate | Process | variant calling annotate snpsift cancer genomics | Annotate a VCF file with another VCF file |
| nf-core/snpsift/dbnsfp | Process | variant calling dbnsfp snpsift cancer genomics predictions | The dbNSFP is an integrated database of functional predictions from multiple algorithms |