nf-core/ampcombi2/complete @ 0.0.0-0c7146d
Summary
A submodule that merges all output summary tables from ampcombi/parsetables in one summary file.
Get started
Add the following snippet to your workflow script to include this module.
include { AMPCOMBI2_COMPLETE } from 'nf-core/ampcombi2/complete'
License
MIT License
Process
Name
|
AMPCOMBI2_COMPLETE |
|---|
Input
1 channel
summaries
list
|
The path to the list of files corresponding to each sample as generated by ampcombi2/parsetables. [*_ampcombi.tsv, *_ampcombi.tsv]
|
|---|
Output
3 channels
#1
log
Ampcombi_complete.log
file
|
A log file that captures the standard output for the entire process in a log file. Can be activated by *.log
|
|---|
#2
tsv
Ampcombi_summary.tsv
file
|
A file containing the complete AMPcombi summaries from all processed samples. *.tsv
|
|---|
#3
versions_ampcombi
tuple
${task.process}
string
|
The name of the process |
|---|---|
ampcombi
string
|
The name of the tool |
ampcombi --version | sed 's/ampcombi //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| ampcombi2/complete | This merges the per sample AMPcombi summaries generated by running 'ampcombi2/parsetables'. | https://github.com/paleobiotechnology/AMPcombi |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | be790aafaa178554b403f862164eb27042f0b35a |
| Release Date | 08 Apr 2026 18:42:08 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fampcombi2%2Fcomplete/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/ampcombi2/complete/blobs/sha256:9dbe1d6c3aefe6dd7e2898e2f221a3d3c5ef7842fc646e5bdc6c7c9ab1c109e7 |
| Size | 2.3 KB |
| Checksum | sha256:9dbe1d6c3aefe6dd7e2898e2f221a3d3c5ef7842fc646e5bdc6c7c9ab1c109e7 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-be790aa | 24 Apr 2026 15:00:32 (UTC) | 3 | 2.4 KB | |
| 0.0.0-6c4ed3a | 23 Apr 2026 15:02:02 (UTC) | 1 | 2.3 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:01:33 (UTC) | 1 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:42:08 (UTC) | 3 | 2.3 KB |