Nextflow Modules
Showing module(s) with keyword "STARsolo"
| Module | Keywords | Description |
|---|---|---|
| cellgeni/starsolo10x | STARsolo STAR alignment single-cell 10x RNA-seq count matrix | Aligns 10x single-cell RNA-seq FASTQs to a reference genome using STARsolo, producing per-sample output directories with count matrices and summary statistics. |
| cellgeni/starsoloqc | STARsolo STAR QC quality control single-cell 10x RNA-seq | Collects QC statistics from STARsolo output directories, producing a merged TSV summary of alignment and cell-calling metrics across all samples in a dataset. |