Nextflow Modules
Showing module(s) with keyword "STR"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/expansionhunter | Process | STR repeat_expansions bam cram vcf json | Estimate repeat sizes using NGS data |
| nf-core/expansionhunterdenovo/profile | Process | expansionhunterdenovo profile STR genome bam cram | Compute genome-wide STR profile |
| nf-core/gangstr | Process | gangstr STR bam cram vcf | GangSTR is a tool for genome-wide profiling tandem repeats from short reads. |
| nf-core/stranger | Process | STR repeat_expansions annotate vcf | Annotates output files from ExpansionHunter with the pathologic implications of the repeat sizes. |