Nextflow Modules
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Found 4 module(s) matching "deeptools bamcoverage" filtered by keyword "depth"
| Module | Keywords | Description | Score |
|---|---|---|---|
| nf-core/deeptools/bamcoverage | coverage depth track | This tool takes an alignment of reads or fragments as input (BAM file) and generates a coverage track (bigWig or bedGraph) as output. | 0.89 |
| nf-core/samtools/coverage | depth samtools bam | produces a histogram or table of coverage per chromosome | 0.86 |
| nf-core/blobtk/depth | bam gzipped blobtoolkit depth | Creates a bed file containing the depth of data at intervals of an aligned bam. | 0.86 |
| nf-core/metabat2/jgisummarizebamcontigdepths | sort binning depth bam coverage de novo assembly | Depth computation per contig step of metabat2 | 0.85 |