Nextflow Modules
Showing module(s) with keyword "dia"
| Module | Keywords | Description |
|---|---|---|
| nf-core/diann/insilicolibrarygeneration | diann spectral library proteomics deep learning dia | Generate in silico predicted spectral library using DIA-NN deep learning predictor. This module uses DIA-NN software for data-independent acquisition (DIA) proteomics data processing. Output materials should include attribution: "Generated using DIA-NN". |
| nf-core/easypqp/convert | proteomics spectral library dia pepxml idxml mzml | Convert peptide identifications (pepXML or idXML) and the matching spectra (mzML, mzXML or MGF) into EasyPQP PSM and peak pickle files for spectral library generation. |
| nf-core/easypqp/library | proteomics spectral library dia openswath diann | Generate a spectral library (TSV) from EasyPQP PSM and peak pickle files. |