Nextflow Modules
Showing module(s) with keyword "concatenate"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/cat/cat | Process | concatenate gzip cat | A module for concatenation of gzipped or uncompressed files |
| nf-core/cat/fastq | Process | cat fastq concatenate compress | Concatenates fastq files. Supports both compressed (.gz) and uncompressed inputs; uncompressed files are automatically gzip-compressed during concatenation. |
| nf-core/csvtk/concat | Process | concatenate tsv csv | Concatenate two or more CSV (or TSV) tables into a single table |
| nf-core/find/concatenate | Process | concatenate gzip cat find pigz | A module for concatenation of gzipped or uncompressed files getting around UNIX terminal argument size |
| nf-core/graphtyper/vcfconcatenate | Process | combine concatenate variant vcf | Tools for population-scale genotyping using pangenome graphs. |
| nf-core/qsv/cat | Process | concatenate tsv csv | Concatenate two or more CSV (or TSV) tables into a single table |
| nf-core/semibin/concatenatefasta | Process | concatenate fasta binning | Concatenate multiple sample FASTAs to a single FASTA with the correct header format for SemiBin2 |
| nf-neuro/image_math | Process | absolute addition arithmetic blur ceil clip closing concatenate convert correlation difference dilation erosion floor image image-processing intersection invert log math mean multiplication normalize normalize-max normalize-sum opening operations round std subtraction threshold union | Perform various mathematical operations on one or several NIFTI images. The number of images required as input depends on the operation chosen. Some operations require only one image input, while some may require two or more. Several operations require a VALUE to be defined within the args. Note: This script is loading all images in memory, will often crash after a few hundred images. |