Nextflow Modules
Showing module(s) with keyword "image"
| Module | Keywords | Description |
|---|---|---|
| nf-core/cellpose | segmentation image cellpose gpu spatial-transcriptomics | cellpose segments cells in images using GPU-accelerated deep learning |
| nf-core/pretextsnapshot | pretext image hic png jpg bmp contact maps | A module to generate images from Pretext contact maps. |
| nf-core/spotiflow | imaging image microscopy transcriptomics spatial spot detection | Spotiflow, accurate and efficient spot detection with stereographic flow. |
| nf-core/stardist | stardist segmentation image gpu spatial-transcriptomics | Cell and nuclear segmentation with star-convex shapes |