Nextflow Modules
Showing module(s) with keyword "pca"
| Module | Keywords | Description |
|---|---|---|
| nf-core/custom/clustervisualization | clustering visualization pca umap tsne dimension-reduction | Generates UMAP and t-SNE visualizations colored by cluster |
| nf-core/custom/pcaclustering | clustering kmeans dbscan pca embeddings | Performs KMeans or DBSCAN clustering on a sample-by-feature numeric matrix (e.g. principal components, embeddings) |
| nf-core/plink2/pca | plink2 pca plink2_pca | Perform PCA analysis using PLINK |
| nf-core/scanpy/pca | pca principal-component-analysis scanpy single-cell dimensionality-reduction | Perform principal component analysis (PCA) on single-cell RNA-seq data using Scanpy |