Nextflow Modules
Showing module(s) with keyword "peak-calling"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/genrich | Process | peak-calling ChIP-seq ATAC-seq | Peak-calling for ChIP-seq and ATAC-seq enrichment experiments |
| nf-core/macs2/callpeak | Process | alignment atac-seq chip-seq peak-calling | Peak calling of enriched genomic regions of ChIP-seq and ATAC-seq experiments |
| nf-core/macs3/callpeak | Process | alignment atac-seq chip-seq peak-calling | Peak calling of enriched genomic regions of ChIP-seq and ATAC-seq experiments |
| nf-core/pints/caller | Process | peak-calling CoPRO GRO-cap PRO-cap CAGE NETCAGE RAMPAGE csRNA-seq STRIPE-seq PRO-seq GRO-seq | Main caller script for peak calling |