Nextflow Modules
Showing module(s) with keyword "realignment"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/abra2 | Process | alignment realignment indels bam dna rna splice-junctions assembly | Assembly Based ReAligner for next-generation sequencing data |
| nf-core/gatk/indelrealigner | Process | bam vcf variant calling indel realignment | Performs local realignment around indels to correct for mapping errors |
| nf-core/gatk/realignertargetcreator | Process | bam vcf variant calling indel realignment targets | Generates a list of locations that should be considered for local realignment prior genotyping. |