Nextflow Modules
Showing module(s) with keyword "variant-calling"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/happy/report | Process | happy benchmark report html variant-calling | Generate standalone HTML benchmarking reports from GA4GH / hap.py variant-calling metrics CSVs |
| nf-core/poolsnp | Process | poolseq mpileup variant-calling | PoolSNP is a heuristic SNP caller, which uses an MPILEUP file and a reference genome in FASTA format as inputs. |
| nf-core/stacks/refmap | Process | rad-seq gbs variant-calling population-genomics genomics | ref_map.pl script from Stacks for the analysis of RAD-seq data when a reference genome is available. |