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Nextflow Pipelines

Nextflow pipelines hosted in Git repositories. Each published release records the Git revision it runs and the launch configuration it ships with.

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3 pipeline(s) matching "nanopore-sequencing".

Pipeline Keywords Description
nf-core/bacass
2.6.1
assembly bacterial-genomes denovo denovo-assembly +4 Simple bacterial assembly and annotation pipeline
nf-core/denovohybrid
0.0.0-9299621
assembly denovo denovo-assembly genome-assembly +4 UNDER CONSTRUCTION: Hybrid genome assembly pipeline using a combination of long and short sequencing reads
nf-core/mag
5.5.0
annotation assembly binning long-read-sequencing +4 Assembly and binning of metagenomes