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Nextflow Pipelines

Nextflow pipelines hosted in Git repositories. Each published release records the Git revision it runs and the launch configuration it ships with.

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3 pipeline(s) matching "long-read-sequencing".

Pipeline Keywords Description
nf-core/mag
5.5.0
annotation assembly binning long-read-sequencing +4 Assembly and binning of metagenomes
nf-core/scnanoseq
1.3.0
10xgenomics long-read-sequencing nanopore rna-seq +3 Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics
nf-core/viralrecon
3.0.0
amplicon artic assembly covid-19 +11 Assembly and intrahost/low-frequency variant calling for viral samples