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Nextflow Pipelines

Nextflow pipelines hosted in Git repositories. Each published release records the Git revision it runs and the launch configuration it ships with.

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4 pipeline(s) matching "qc".

Pipeline Keywords Description
nf-core/genomeqc
1.0.1
genome-assembly-evaluation genomics phylogenetic-trees quality-control Compare the quality of multiple genomes, along with their annotations.
nf-core/hgtseq
1.1.0
bwa-mem bwa-mem2 fastqc genomics-visualization +9 A pipeline to investigate horizontal gene transfer from NGS data
nf-core/nanoseq
3.1.0
alignment demultiplexing nanopore qc Nanopore demultiplexing, QC and alignment pipeline
nf-core/ribomsqc
1.0.0
n/a QC pipeline that monitors mass spectrometer performance in ribonucleoside analysis