Nextflow Modules
Showing module(s) with keyword "kmers"
| Module | Keywords | Description |
|---|---|---|
| nf-core/kmcp/compute | metagenomics classify taxonomic profiling fastq sequences kmers | Generate k-mers (sketches) from FASTA/Q sequences |
| nf-core/kmcp/index | metagenomics classify taxonomic profiling fastq sequences kmers index | Construct KMCP database from k-mer files |
| nf-core/kmcp/merge | metagenomics classify taxonomic profiling fastq sequences kmers | Merge search results from multiple databases. |
| nf-core/kmcp/profile | metagenomics classify taxonomic profiling fastq sequences kmers index | Generate taxonomic profile from search results |
| nf-core/kmcp/search | metagenomics classify taxonomic profiling fastq sequences kmers | Search sequences against database |
| nf-core/krakenuniq/preloadedkrakenuniq | classify metagenomics kmers fastq db | Classifies metagenomic sequence data using unique k-mer counts |