Nextflow Modules
Showing module(s) with keyword "kmers"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/kmcp/compute | Process | metagenomics classify taxonomic profiling fastq sequences kmers | Generate k-mers (sketches) from FASTA/Q sequences |
| nf-core/kmcp/index | Process | metagenomics classify taxonomic profiling fastq sequences kmers index | Construct KMCP database from k-mer files |
| nf-core/kmcp/merge | Process | metagenomics classify taxonomic profiling fastq sequences kmers | Merge search results from multiple databases. |
| nf-core/kmcp/profile | Process | metagenomics classify taxonomic profiling fastq sequences kmers index | Generate taxonomic profile from search results |
| nf-core/kmcp/search | Process | metagenomics classify taxonomic profiling fastq sequences kmers | Search sequences against database |
| nf-core/krakenuniq/preloadedkrakenuniq | Process | classify metagenomics kmers fastq db | Classifies metagenomic sequence data using unique k-mer counts |