Nextflow Modules
Showing module(s) with keyword "microbes"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/checkm/lineagewf | Process | checkm mag metagenome quality isolates microbes single cells completeness contamination bins genome bins | CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes. |
| nf-core/checkm/qa | Process | checkm mag metagenome quality isolates microbes single cells completeness contamination bins genome bins qa quality assurnce | CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes. |
| nf-core/resfinder/run | Process | blastn kma microbes resfinder resistance genes | ResFinder identifies acquired antimicrobial resistance genes in total or partial sequenced isolates of bacteria |