Nextflow Modules
Showing module(s) with keyword "plasmid"
| Module | Keywords | Description |
|---|---|---|
| nf-core/genomad/download | metagenomics genomad database download phage virus plasmid | Download geNomad databases and related files |
| nf-core/genomad/endtoend | metagenomics genomad database download phage virus plasmid | Identify mobile genetic elements present in genomic assemblies |
| nf-core/mobsuite/recon | bacteria plasmid cluster | A tool to reconstruct plasmids in bacterial assemblies |
| nf-core/plasmidfinder | fasta fastq plasmid | Identify plasmids in bacterial sequences and assemblies |
| nf-core/plasmidid | assembly plasmid bacterial | assembles bacterial plasmids |
| nf-core/staramr/search | amr plasmid mlst genomics | Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases. |