Nextflow Modules
Showing module(s) with keyword "quality_control"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/bam_qc_rnaseq | Workflow | rnaseq bam qc quality_control preseq qualimap dupradar rseqc featurecounts biotype | Run post-alignment QC tools on RNA-seq BAM files including library complexity estimation (Preseq), biotype QC (featureCounts), RNA-seq-specific QC metrics (Qualimap), duplicate rate analysis (dupRadar), and comprehensive RSeQC analysis. |
| nf-core/fastq_trim_fastp_fastqc | Workflow | qc quality_control adapters trimming fastq | Read QC, fastp trimming and read qc |
| nf-core/sequali | Process | quality_control qc preprocessing | Sequence quality metrics for FASTQ and uBAM files. |