Nextflow Modules
Showing module(s) with keyword "simulation"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/hmmer/hmmemit | Process | hidden markov model HMM hmmer sequence emission simulation profile | emit sequences from a profile HMM |
| nf-core/holodeck/eval | Process | simulation evaluation alignment accuracy benchmarking | Evaluate alignment accuracy of holodeck-simulated reads |
| nf-core/holodeck/methylate | Process | simulation vcf methylation bisulfite benchmarking | Generate a methylation-annotated VCF from a reference genome with holodeck |
| nf-core/holodeck/mutate | Process | simulation vcf mutations variants benchmarking | Generate a VCF of random mutations from a reference genome with holodeck |
| nf-core/holodeck/simulate | Process | simulation fastq reads sequencing benchmarking | Simulate sequencing reads from a reference genome with holodeck |
| nf-core/survivor/simsv | Process | structural variants simulation sv vcf | Simulate an SV VCF file based on a reference genome |