Nextflow Modules
Showing module(s) with keyword "tximport"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/quantify_rsem | Workflow | rnaseq quantification rsem tximport | Perform quantification with RSEM to produce count tables, legacy merge matrices, and SummarizedExperiment objects |
| nf-core/quant_tximport_summarizedexperiment | Workflow | rnaseq quantification tximport summarizedexperiment salmon kallisto rsem | Post-process transcript-level quantification results using tximport to produce count matrices and SummarizedExperiment objects |