nf-core/pydamage/analyze @ 0.0.0-3fc6d40
Summary
Damage parameter estimation for ancient DNA
Get started
Add the following snippet to your workflow script to include this module.
include { PYDAMAGE_ANALYZE } from 'nf-core/pydamage/analyze'
License
MIT License
Process
Name
|
PYDAMAGE_ANALYZE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
bam
file
|
BAM/CRAM/SAM file *.{bam,cram,sam}
|
bai
file
|
BAM/CRAM/SAM index file *.{bai,crai,sai}
|
Output
2 channels
#1
csv
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
${prefix}_pydamage_results.csv
file
|
PyDamage results as csv files *.csv
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| pydamage | Damage parameter estimation for ancient DNA | https://github.com/maxibor/pydamage |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:27:54 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fpydamage%2Fanalyze/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/pydamage/analyze/blobs/sha256:d73a6c1c522bb67de5fcfc39130b59fc7ac22c838a01ae191537903fecb61724 |
| Size | 2.4 KB |
| Checksum | sha256:d73a6c1c522bb67de5fcfc39130b59fc7ac22c838a01ae191537903fecb61724 |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:39:02 (UTC) | 4 | 2.4 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:27:54 (UTC) | 4 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:29:21 (UTC) | 3 | 2.4 KB |