Nextflow Modules
Showing module(s) with keyword "svcf"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/octopusv/correct | Process | structural variant sv svcf normalize | Standardize a caller VCF into OctopuSV SVCF format. |
| nf-core/octopusv/filter | Process | structural variant sv svcf filter | Filter SVCF based on specified criteria |
| nf-core/octopusv/merge | Process | structural variants merge genomics svcf | Merge and harmonize structural variant calls from multiple samples. |
| nf-core/octopusv/subset | Process | structural variant sv svcf subset | Subset an OctopuSV SVCF by sample and/or caller. |
| nf-core/octopusv/svcf2bed | Process | svcf bed structural variant conversion | Converts octopusv SVCF files to the standard BED format |