Nextflow Modules
Showing module(s) with keyword "structural"
| Module | Keywords | Description |
|---|---|---|
| nf-core/delly/call | genome structural variants bcf | Call structural variants |
| nf-core/pbsv/discover | variant pacbio structural | pbsv - PacBio structural variant (SV) signature discovery tool |
| nf-core/rtgtools/svdecompose | svdecompose structural vcf rtg-tools | The svdecompose tool of RTG tools. It is used to decompose structural variants to BNDs |
| nf-core/severus | structural variation somatic germline long-read | Severus is a somatic structural variation (SV) caller for long reads (both PacBio and ONT) |
| nf-core/svtools/vcftobedpe | structural bedpe vcf conversion variants | Convert a VCF file to a BEDPE file. |
| nf-core/tiddit/sv | structural variants vcf | Identify chromosomal rearrangements. |