nf-core/dastool/scaffolds2bin @ 0.0.0-0c7146d
Summary
Helper script to convert a set of bins in fasta format to tabular scaffolds2bin format
Get started
Add the following snippet to your workflow script to include this module.
include { DASTOOL_SCAFFOLDS2BIN } from 'nf-core/dastool/scaffolds2bin'
License
MIT License
Process
Name
|
DASTOOL_SCAFFOLDS2BIN |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fasta
file
|
Fasta or list of fasta files recommended to be gathered via with .collect() of bins *.{fa,fa.gz,fas,fas.gz,fna,fna.gz,fasta,fasta.gz}
|
extension
string
|
Fasta file extension (fa | fas | fasta | ...), but without .gz suffix, even if gzipped input. |
|---|
Output
2 channels
#1
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#2
scaffolds2bin
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.tsv
file
|
tabular scaffolds2bin file for DAS tool input *.scaffolds2bin.tsv
|
| Tool | Description | Homepage |
|---|---|---|
| dastool | DAS Tool is an automated method that integrates the results of a flexible number of binning algorithms to calculate an optimized, non-redundant set of bins from a single assembly. | https://github.com/cmks/DAS_Tool |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 18:55:42 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fdastool%2Fscaffolds2bin/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/dastool/scaffolds2bin/blobs/sha256:c1eed2f8f6a49d827b1627921b30fc72034d4906e18c9e498ff38dc3a338df79 |
| Size | 2.6 KB |
| Checksum | sha256:c1eed2f8f6a49d827b1627921b30fc72034d4906e18c9e498ff38dc3a338df79 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:12:30 (UTC) | 3 | 2.2 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:08:48 (UTC) | 3 | 2.2 KB | |
| 0.0.0-5d5b444 | 21 Apr 2026 15:00:52 (UTC) | 2 | 2.1 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:55:42 (UTC) | 3 | 2.6 KB |