Nextflow Modules
Showing module(s) with keyword "alternative splicing"
| Module | Keywords | Description |
|---|---|---|
| nf-core/misopy/index | misopy index gff alternative splicing | Build an indexed representation of a GFF for efficient retrieval of genes |
| nf-core/rmats/prep | splicing RNA-Seq alternative splicing exon intron rMATS | MATS is a computational tool to detect differential alternative splicing events from RNA-Seq data. |
| nf-core/suppa/clusterevents | alternative splicing clustering suppa genomics | Cluster events based on PSI values and significantly differentially spliced events using SUPPA2. |
| nf-core/suppa/diffsplice | alternative splicing differential splicing suppa genomics | Perform differential splicing analysis using SUPPA. |
| nf-core/suppa/generateevents | suppa alternative splicing genomics | Generates alternative splicing events from a GTF file using SUPPA. |
| nf-core/suppa/psiperevent | alternative splicing suppa psi genomics | Calculate PSI values for alternative splicing events using SUPPA |